Handbook of Hidden Markov Models in Bioinformatics

Focuses on how to choose and use various methods and programs available for HMMs. This work explores HMM implementations important in bioinformatics, including SAM, HMMER, Wise2, PSI-BLAST, and Meta-MEME, and shows how numerous databases and programs, such as Pfam, SMART, SUPERFAMILY, and PANTHER, are used in bioinformatics projects.